MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Mammaliicoccus sciuri
ACT.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 62
bases: 2,736,455 bps
CDS: 2,710
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,779
Total number of protein coding genes annotated/found:
2,710
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5014|JADGMB010000030.1
SEQF5014_02259
Genome Viewer
NA
AA
267/89
627-361
2%2C5-dichloro-2%2C5-cyclohexadiene-1%2C4-diol dehydrogenase
SEQF5014|JADGMB010000030.1
SEQF5014_02260
Genome Viewer
NA
AA
249/83
891-643
hypothetical protein
SEQF5014|JADGMB010000030.1
SEQF5014_02261
Genome Viewer
NA
AA
111/37
1287-1177
hypothetical protein
SEQF5014|JADGMB010000030.1
SEQF5014_02262
Genome Viewer
NA
AA
204/68
1527-1324
hypothetical protein
SEQF5014|JADGMB010000030.1
SEQF5014_02263
Genome Viewer
NA
AA
651/217
2184-1534
hypothetical protein
SEQF5014|JADGMB010000030.1
SEQF5014_02264
Genome Viewer
NA
AA
183/61
2607-2789
hypothetical protein
SEQF5014|JADGMB010000030.1
SEQF5014_02265
Genome Viewer
NA
AA
360/120
2839-3198
hypothetical protein
SEQF5014|JADGMB010000030.1
SEQF5014_02266
Genome Viewer
NA
AA
411/137
3349-3759
hypothetical protein
SEQF5014|JADGMB010000030.1
SEQF5014_02267
Genome Viewer
NA
AA
855/285
3990-4844
hypothetical protein
SEQF5014|JADGMB010000030.1
SEQF5014_02268
Genome Viewer
NA
AA
897/299
4841-5737
hypothetical protein
SEQF5014|JADGMB010000030.1
SEQF5014_02269
Genome Viewer
NA
AA
696/232
6888-6193
hypothetical protein
SEQF5014|JADGMB010000030.1
SEQF5014_02270
Genome Viewer
NA
AA
924/308
7813-6890
hypothetical protein
SEQF5014|JADGMB010000030.1
SEQF5014_02271
Genome Viewer
NA
AA
318/106
8208-7891
hypothetical protein
SEQF5014|JADGMB010000030.1
SEQF5014_02272
Genome Viewer
NA
AA
855/285
8346-9200
Beta-lactamase
SEQF5014|JADGMB010000030.1
SEQF5014_02273
Genome Viewer
NA
AA
1407/469
10673-9267
D-xylose transporter
SEQF5014|JADGMB010000030.1
SEQF5014_02274
Genome Viewer
NA
AA
1422/474
12150-10729
L-arabinose isomerase
SEQF5014|JADGMB010000030.1
SEQF5014_02275
Genome Viewer
NA
AA
696/232
12859-12164
L-ribulose-5-phosphate 4-epimerase AraD
SEQF5014|JADGMB010000030.1
SEQF5014_02276
Genome Viewer
NA
AA
1632/544
14459-12828
Xylulose kinase
SEQF5014|JADGMB010000030.1
SEQF5014_02277
Genome Viewer
NA
AA
1074/358
15737-14664
Arabinose metabolism transcriptional repressor
SEQF5014|JADGMB010000030.1
SEQF5014_02278
Genome Viewer
NA
AA
339/113
16257-15919
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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